diff -uNr ncbi.original/make/makedis.csh ncbi/make/makedis.csh --- ncbi.original/make/makedis.csh 2004-02-03 15:37:57.000000000 -0500 +++ ncbi/make/makedis.csh 2004-02-05 11:31:16.000000000 -0500 @@ -149,6 +149,11 @@ set platform=linux endif breaksw +# 5-Feb-2004 Joe Landman (landman@scalableinformatics.com) +# patch for opteron support + case "x86_64": + set platform=linux-x86_64 + breaksw case "ppc": set platform=ppclinux breaksw diff -uNr ncbi.original/platform/linux-x86_64.ncbi.mk ncbi/platform/linux-x86_64.ncbi.mk --- ncbi.original/platform/linux-x86_64.ncbi.mk 1969-12-31 19:00:00.000000000 -0500 +++ ncbi/platform/linux-x86_64.ncbi.mk 2004-02-05 11:32:46.000000000 -0500 @@ -0,0 +1,53 @@ +# +# 2/2/2004 Joe Landman: Fixed x86_64 support +# +# $Id: linux-x86.ncbi.mk,v 1.31 2004/01/09 18:47:22 beloslyu Exp $ +# +NCBI_DEFAULT_LCL = lnx +NCBI_MAKE_SHELL = /bin/sh +#warning, the flags -D__USE_FILE_OFFSET64 -D__USE_LARGEFILE64 will allow +#you to work with large (>4Gb) files only if you have glibc version >= 2.1 +#NCBI_CC = gcc -pipe -D__USE_FILE_OFFSET64 -D__USE_LARGEFILE64 +#it appears the flags above do not work anymore with newer libc, +#the new flags should work. Dima. 08/23/01 +NCBI_AR=ar +NCBI_CC = gcc -pipe -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -m64 +NCBI_CFLAGS1 = -c -static +NCBI_LDFLAGS1 = -O3 -m64 -msse2 -static +NCBI_OPTFLAG = -O3 -m64 -msse2 +NCBI_BIN_MASTER = /home/coremake/ncbi/bin +NCBI_BIN_COPY = /home/coremake/ncbi/bins +NCBI_INCDIR = /home/coremake/ncbi/include +NCBI_LIBDIR = /home/coremake/ncbi/lib +NCBI_ALTLIB = /home/coremake/ncbi/altlib +#will work only when you have Motif installed! +NCBI_VIBFLAG = -I/usr/X11R6/include -L/usr/X11R6/lib64 -DWIN_MOTIF +NCBI_VIBLIBS = -lXmu -lXm -lXt -lSM -lICE -lXext -lXp -lX11 -ldl -lpthread +#warning! If you have only dynamic version of Motif or Lesstif +#you should delete -Wl,-Bstatic sentence from the next line: +NCBI_DISTVIBLIBS = -L/usr/X11R6/lib64 -Wl,-Bstatic -lXmu -lXm -lXt -lSM -lICE -lXext -lXp -lX11 -ldl -lpthread +NCBI_OTHERLIBS = -lm +NCBI_RANLIB = ranlib +# Used by makedis.csh +NCBI_MT_OTHERLIBS = -lpthread +NCBI_OTHERLIBS_MT = $(NCBI_MT_OTHERLIBS) -lm +NCBI_THREAD_OBJ = ncbithr.o +NETENTREZVERSION = 2.02c2ASN1SPEC6 + +# uncomment OPENGL_TARGETS to build OpenGL apps; do not change +# OPENGL_NCBI_LIBS! However, may need to set +# OPENGL_INCLUDE and OPENGL_LIBS to suit local environment +# OPENGL_TARGETS = Cn3D +OPENGL_NCBI_LIBS = LIB400=libvibrantOGL.a LIB3000=libncbicn3dOGL.a +OPENGL_INCLUDE = -I/usr/X11R6/include +OPENGL_LIBS = -L/usr/X11R6/lib64 -lGL -lGLU +NCBI_OGLLIBS = -L/usr/X11R6/lib64 -lGL -lGLU + +# uncomment (and change appropriately) these lines to build PNG +# output support into Cn3D (OpenGL version only) +#LIBPNG_DIR = /home/paul/Programs/libpng +#ZLIB_DIR = /home/paul/Programs/zlib + +NCBI_LBSM_SRC = ncbi_lbsmd_stub.c +NCBI_LBSM_OBJ = ncbi_lbsmd_stub.o +